Affinage · Plasmodium

Showing PF3D7_0933200 — CALCYCLIN-BINDING PROTEIN is a alias.

PF3D7_0933200

calcyclin-binding protein, putative

Audit flag: identity unverified
Annotated
2026-09-08
2 papers in source corpus 2 papers cited in narrative 2 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

PF3D7_0933200 (calcyclin-binding protein) is a subunit of the functional Plasmodium falciparum SCF E3 ubiquitin ligase complex, in which it associates with PfCullin-1, PfRbx1, PfSkp1, and PfFBXO1; this assembled complex has demonstrable in vitro ubiquitination activity (PMID:38416790). Its specific biochemical contribution to the complex has not been dissected in the available corpus, and beyond complex membership no substrate or catalytic role is assigned to this subunit (PMID:38416790). In the rodent parasite P. yoelii nigeriensis, the ortholog (PyCacyBP) is expressed as a ~27 kDa protein across all blood stages and exists in both monomeric and dimeric forms (PMID:36707015).

Mechanistic history

Synthesis pass · year-by-year structured walk · 2 steps
  1. 2023 Low

    Whether the calcyclin-binding protein ortholog is expressed during parasite blood stages and what physical form it adopts was previously undefined; characterizing this established its stage expression and oligomeric behavior.

    Evidence Molecular cloning, recombinant expression, and Western blot of P. yoelii nigeriensis parasite lysate with biophysical characterization

    PMID:36707015

    Open questions at the time
    • Establishes expression and monomer/dimer state but assigns no functional mechanism
    • Does not connect the ortholog to any complex or enzymatic activity
    • Findings are in P. yoelii nigeriensis, not directly in P. falciparum
  2. 2024 Medium

    Whether calcyclin-binding protein participates in a defined P. falciparum ubiquitination machinery was unknown; showing it co-purifies with an SCF complex that is enzymatically active established it as a bona fide subunit of a functional E3 ubiquitin ligase.

    Evidence Immunoprecipitation, in vitro protein-protein interaction assays, and in vitro ubiquitination assay in P. falciparum

    PMID:38416790

    Open questions at the time
    • The specific functional contribution of calcyclin-binding protein within the complex is not dissected
    • No substrate of the complex attributable to this subunit is identified
    • Reciprocal Co-IP and activity assay are from a single lab

Open questions

Synthesis pass · forward-looking unresolved questions
  • The precise biochemical role of PF3D7_0933200 within the PfSCF complex — including whether it contributes to substrate recognition, complex assembly, or regulation — remains unresolved.
  • No substrate or adaptor function assigned to this subunit specifically
  • No structural model of the subunit within the complex
  • Functional consequence of its monomer/dimer state is unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification
Complex memberships
PfSCF E3 ubiquitin ligase complex (PfCullin-1/PfRbx1/PfSkp1/PfFBXO1/calcyclin-binding protein)

Evidence

Reading pass · 2 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2024 Calcyclin-binding protein (PF3D7_0933200) was identified as a component of the functional Plasmodium falciparum SCF (PfSCF) E3 ubiquitin ligase complex, together with PfCullin-1, PfRbx1, PfSkp1, and PfFBXO1, as confirmed by immunoprecipitation and in vitro protein-protein interaction assays, with the complex also shown to have ubiquitination activity in vitro. Immunoprecipitation, in vitro protein-protein interaction assay, in vitro ubiquitination assay PLoS pathogens Medium 38416790
2023 The P. yoelii nigeriensis ortholog of calcyclin-binding protein (PyCacyBP) is expressed as an ~27 kDa protein in all blood stages of the parasite and exists in both monomer and dimer forms, as determined by cloning, recombinant expression, and parasite lysate analysis. Molecular cloning, recombinant protein expression and purification, SDS-PAGE/Western blot of parasite lysate, biophysical characterization Experimental parasitology Low 36707015

Source papers

Stage 0 corpus · 2 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2024 Plasmodium falciparum contains functional SCF and CRL4 ubiquitin E3 ligases, and CRL4 is critical for cell division and membrane integrity. PLoS pathogens 12 38416790
2023 Molecular and immunological characterization of the calcyclin binding protein in rodent malaria parasite. Experimental parasitology 0 36707015